Skip to main navigation menu Skip to main content Skip to site footer

Vol. 37 No. 1 (2019)

Articles

Molecular methods of species identification used in forensic examinations

DOI: https://doi.org/10.24326/jasbb.2019.1.4
Submitted: May 29, 2019
Published: 2019-05-29

Abstract

Species identification of animals carried out on the basis of molecular biology methods plays an increasingly important role in the practice of forensic laboratories around the world. In Poland, these methods are increasingly used to determine whether a species is protected under the provisions of the Act of 16.04.2004 “on nature protection”. This is due to the numerous cases of illegal trafficking of endangered species of animals, which concerns trade in live animals as well as products and items made from various parts of the body of these animals. In such cases, when identification based on the morphological characteristics of the species not possible, animal DNA analysis is of particular importance. The paper presents typical molecular markers used in animal species identification.

References

Ajmal Ali M., Gyulai G., Hidwegi N., Kerti B., Hemaid F. al, Pandey A. K., Lee J., 2014. The changing epitome of species identification - DNA barcoding. Saudi J. Biol. Sci. 21, 204-231. DOI: 10.1016/j.sjbs.2014.03.003

Anderson S., Bankier A.T., Barrell B.G., Bruijn M.H. de, Coulson A.R., Drouin J., Eperon I.C., Nierlich D.P., Roe B.A., Sanger F., Schreier P.H., Smith A.J., Staden R., Young I.G., 1981. Sequence and organization of the human mitochondrial genome. Nature 290, 457-465. DOI: 10.1038/290457a0

Anderson S., Bruijn M.H. de, Coulson A.R., Eperon I.C., Sanger F., Young I.G., 1982. Complete sequence of bovine mitochondrial DNA, conserved features of the mammalian mitochondrial genome. J. Mol. Biol. 156, 683-684.

Andrews R.M., Kubacka I., Chinnery P.F., Lightowlers R.N., Turnbull D.M., Howell N., 1999. Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA. Nat. Genet. 23(2), 147. DOI: 10.1038/13779

Brown W.M., 1980. Polymorphism in mitochondrial DNA of humans as revealed by restriction endonuclease analysis. Proceedings of the National Academy of Sciences, USA, 77, 3605-3609. DOI: 10.1073/pnas.77.6.3605

Cooper A., Lalueza-Fox C., Anderson A., Rambaut A., Austin J., Ward R., 2001. Complete mitochondrial genome sequences of two extinct moas clarify ratite evolution. Nature 409(1), 704-706. DOI 10.1038/35055536

Dębska M., 2013. Bieżące kierunki w kryminalistycznych badaniach dotyczących identyfikacji zwierząt należących do gatunków zagrożonych wyginięciem. Probl. Kryminal. 280(2), 28-31.

Foran D.R., Hixson J.E., Brown W.M., 1998. Comparison of ape and human sequences that regulate mitochondrial DNA transcription and D-loop DNA synthesis. Nucleic Acids Res. 16, 5841-5861. DOI: 10.1093/nar/16.13.5841

Giles R.E., Blanc H., Cann H.M., Wallace D.C., 1980. Maternal inheritance of human mitochondrial DNA. Proceedings of the National Academy of Sciences, USA, 77, 6715-6719. DOI: 10.1073/pnas.77.11.6715

Haddrath O., Baker A.J., 2001. Complete mitochondrial DNA geonome sequences of extinct birds: ratite phylogenetics and the vicariance biogeography hypothesis. Proc. R. Soc. Lond. 268(2), 939-945. DOI: 10.1098/rspb.2001.1587

Heise W., Bobik W., Kubisz P., Kajtoch Ł., 2015. A three-marker DNA barcoding approach for ecological studies of xerothermic plants and herbivorous insects from central Europe. Bot. J. Linn. Soc. 177(4), 576-592. DOI: 10.1111/boj.12261

Herbert P.D.N., Stoeckle M.Y., Zemlak T.S., Francis C.M., 2004. Identification of Birds through DNA Barcodes. PLoS Biology 2(10), 312. DOI: 10.1371/journal.pbio.0020312

Hiendleder S., Lewalski H., Wassmuth R., Janke A., 1998. The complete mitochondrial DNA sequence of the domestic sheep (Ovisaries) and comparison with the other major ovine haplotype. J. Mol. Evol. 47, 441-448. DOI: 10.1007/PL00006401

Hofreiter M., Paijmans J.L., Goodchild H., Camilla F., Speller C.F., Barlow A., Fortes G.G., Thomas A., Ludwig A., Collins M.J., 2014. The future of ancient DNA: Technical advances and conceptual shifts. Bioessays 36(2), 10-11. DOI: 10.1002/bies.201400160

Hsieh H.M., Huang L.H., Tsai L.C., Liu C.L., Kuo Y.C., Hsiao C.T., Linacre A., Lee J.C., 2006. Species identification of Kachuga tecta using the cytochrome b gene. J. Forensic Sci. 51(1), 52-56. DOI: 10.1111/j.1556-4029.2005.00004.x

Hsieh H.M., Huang L.H., Tsai L.C., Tsai L.H., Kuo Y.C., Meng H.H., Linacre A., Lee J.C., 2003. Species identification of rhinoceros horns using the cytochrome b gene. J. Forensic Sci. 136(1), 1-11.

Kelle J., Carmon J., Pucherelli S., Hosler D., 2014. Identification of Unknown Organisms by DNA Barcoding: A Molecular Method for Species Classification. Tech. Memo. 86(68220), 14-15.

Korytko M., Łaczmańska I., 2016. Sekwencje mikrosatelitarne i ich wykorzystanie w diagnostyce medycznej. Kosmos 310(65), 11-16.

Koseniuk A., Szumiec A., Rubiś D., Radko A., 2015. Różnice w budowie i funkcjonowaniu genomu mitochondrialnego i jądrowego. Wiad. Zoot. 53(2), 98-102.

Lee J.C-I., Hsieh H.M., Huang L.H., Kuo Y.C., Wu J.H., Chin S.C., Lee A.H., Linacre A., Tsai L.C., 2009. Ivory identification by DNA profiling of cytochrome b gene. Int. J. Legal Med. 123(2), 117-121. DOI: 10.1007/s00414-008-0264-0

Lee J.C-I., Tsai L.C., Huang M.T., Jhuang J.A., Yao C.T., Chin S.C., Wang L.C., Linacre A., Hsieh H.M., 2008. A novel strategy for avian species identification by cytochrome b gene. Electrophoresis 29, 2413-2418. DOI: 10.1002/elps.200700711

Listos P., Dylewska M., Gryzińska M., 2016. Sprzeczny z Konwencją Waszyngtońską (CITES) przemyt zwierząt do Polski. Życie Wet. 91(4), 238-241.

Malyarchuk B.A., Rogozin I.B., Berikov V.B., Derenko M.V., 2002. Analysis of phylogenetically reconstructed mutational spectra in human mitochondrial control region. Hum. Genet. 111, 46-53. DOI: 10.1007/s00439-002-0740-4

McGarth M., 2012. Wildlife crime profound threat to nations, says report BBC News, 12.12.2012. https://www.bbc.com/news/science-environment-20679454

Meganathan P.R., Dubey B., Haque I., 2009. Molecular identification of crocodile species using novel primers for forensic analysis. Conserv. Genet. 10(3), 767-770. DOI: 10.1007/s10592- -008-9658-2

Moore M.K., Bemss J.A., Rce S.M., Quattro J.M., Woodley C.M., 2003. Use of restriction fragment length polymorphisms to identify sea turtle eggs and cooked meats to species. Conserv. Genet. 4(1), 95-103. DOI: 10.1023/A:1021881319271

Pepin L., McEwing R., Carvalho G.R., Ogden R., 2008. A DNA - Based Approach for the Forensic Identification of Asiatic Black Bear (Ursusthibetanus) in a Traditional Asian Medicine. J. Forensic Sci. 53(6), 1358-1362. DOI: 10.1111/j.1556-4029.2008.00857.x

Prusak B., Grzybowski T., Gralak M., Grzybowski G., 2005. Przydatność analizy sekwencji genu cytochromu b mitochondrialnego DNA do określenia pochodzenia śladów biologicznych zwierząt i ludzi. Med. Weter. 61, 162-165.

Rohilla M.S., Tiwari P.K., 2008. Restriction fragment length polymorphisms among five species of Indian freshwater turtles. J. Appl. Genet. 49(2), 167-182. DOI: 10.1007/BF03195610

Romanowicz M., Podgórska Z., 2010. Badanie zaopatrzenia rynku internetowego oraz targów i sklepów specjalistycznych na terenie Warszawy w tradycyjną medycynę azjatycką oraz inne produkty zawierające części zwierząt i roślin chronionych Konwencją CITES. WWF Polska, Światowy Fundusz na rzecz Przyrody, ss. 24.

Salas A., Bandelt H.J., Macaulay V., Richards M.B., 2007. Phylogeographic investigations: The role of trees in forensic genetics. Forensic Sci. Int. 168, 1-13. DOI: 10.1016/j.forsciint. 2006.05.037

Skonieczna K., Bednarek J., Rogalla U., Woźniak M., Gorzkiewicz M., Linkowska K., Duleba A., Śliwka K., Grzybowski T., 2012. Wykorzystanie osiągnięć genomiki mitochondrialnej w badaniach genetyczno-sądowych opartych na analizie sekwencji ludzkiego mitochondrialnego DNA. Arch. Med. Sąd. Kryminol. 62, 213-218.

Skuza L., Demska K., Adamczyk A., 2015. Barkoding jako nowoczesne narzędzie biologii molekularnej. Post. Biol. Kom. 42(4), 621-632.

Sloan D.B., Alverson A.J., Chuckalovcak J.P., Wu M., McCauley D.E., Palmer J.D., Taylor D.R., 2012. Rapid evolution of enormous, multichromosomal genomes in flowering plant mitochondria with exceptionally high mutation rates. PLoS Biology, 10(1), 1371. DOI: 10.1371/journal.pbio.1001241

Tully L.A., Parsons T.J., Steighner R.J., Holland M.M., Marino M.A., Prenger V.L, 2000. A sensitive denaturating gradient-gel electrophoresis assay reveals a high 133 frequency of heteroplasmy in hypervariable region I of the human mtDNA control region. Am. J. Hum. Genet. 67, 432-443. DOI: 10.1086/302996

Ursing B.M., Arnason U., 1998. The complete mitochondrial DNA sequence of the pig (Sus scrofa). J. Mol. Evol. 47, 302-306. DOI: 10.1007/PL00006388

Ustawa z dnia 16 kwietnia 2004 r. o ochronie przyrody. Dz.U. 2004 Nr 92, poz. 880.

Wan Q.H., Fang S.G., 2003. Application of species - specific polymerase chain reaction in the forensic identification of tiger species. Forensic Sci. Int. 131(1), 75-78.

Wetton J.H., Tsang C.S., Roney C.A., Spriggs A.C., 2004. An extremely sensitive species - specific ARMs PCR test for the presence of tiger bone DNA. Forensic Sci. Int. 140(1), 139-145.

Wozney K.M., Wilson P.J., 2012. Real-time PCR detection and quantification of elephantid DNA; Species identification for highly processed samples associated with the ivory rade. Forensic Sci. Int. 219, 106-112. DOI: 10.1016/j.forsciint.2011.12.006

Xu X., Aranson U., 1994. The complete mitochondrial DNA sequence of the horse Equus caballus: extensive heteroplasmy of the control region. Gene 48, 357-362.

Downloads

Download data is not yet available.

Most read articles by the same author(s)

Similar Articles

<< < 1 2 3 4 5 

You may also start an advanced similarity search for this article.