Multivariate analysis of breeding value and genetic divergence in blackcurrant (Ribes nigrum L.) varieties detected by general combining ability effects
Wiesław Mądry
Warsaw Agricultural UniversityPaweł Krajewski
Institute of Genetics, Polish Academy of SciencesStanisław Pluta
Institute of Horticulture in SkierniewiceEdward Edward Żurawicz
Institute of Horticulture in SkierniewiceAbstract
Multivariate characterization of breeding value and evaluation of genetic divergence in five blackcurrant (Ribes nigrum L.) varieties are presented. In the study general combining ability effects (GCA) estimated over two years in a full-diallel cross design (Griffing’s method 1) for fruit yield per plant, yield-contributing traits and resistance traits have been elaborated. The multivariate analysis of variance (MANOVA) according to the fixed Griifing’s model and canonical variate analysis for GCA effects have been used. The suggested statistical approach delivers information for two known and commonly accepted criterions of successful selecting parents for crosses in breeding programs, both multivariate estimates of GCA effects of parents and their genetic distances, here based on multivariate GCA effects. GCA effects for fruit yield per plant, bush vigour, spring frost damage to flowers, infestation by white pine blister rust and powdery mildew had the largest discrimination power in multivariate GCA divergence of the parents. It was proved that the breeding value of potential parents regarding productivity attributes could be the predominant criterion of proper parents selecting for crosses in blackcurrant breeding. Genetic distance evaluated on the basis of multivariate GCA effects has not been a powerful predictor of progenies productivity. The paper is thought mainly as experimental, methodological study on effective using and usefulness of the suggested statistical procedure in researches for plant breeding purposes. The showed results could be also meaningful for blackcurrant breeding.
Keywords:
blackcurrant, diallel cross design, combining ability, MANOVA, canonical variate analysis (CVA)References
Abreu A. F. B., Ramalho M. A. P., Ferreira D. F., 1999. Selection potential for seed yield from intra- and inter-racial populations in common bean. Euphytica 108, 121–127.
Albuquerque A. S., Bruckner C. H., Cruz C. D., Salomão L. C. C., 1998. Multivariate analysis of genetic diversity of peach and nectarine cultivars. Acta Hort. (ISHS) 465, 285–292.
Ali M., Copeland L. O., Elias S. G., Kelly J. D., 1995. Relationship between genetic distance and heterosis for yield and morphological traits in winter canola (Brassica napus L.). Theor. Appl. Genet. 91, 118–121.
Bernardo R., 1992. Relationship between single cross performance and molecular marker heterozygosity. Theor Appl Genet 83, 628–634.
Betrán F. J., Ribaut J. M., Beck D., Gonzalez de León D., 2003. Genetic diversity, specific combining ability, and heterosis in tropical maize under stress and nonstress environments. Crop Sci. 43, 797–806.
Bhatt G. M., 1970. Multivariate analysis approach to selection of parents for hybridization aiming at yield improvement. Aust. J. Agric. Res. 21, 1–7.
Bos I., Sparnaaij L. D., 1993. Component analysis of complex characters in plant breeding. II. The pursuit of heterosis. Euphytica 70, 237–245.
Bourion V., Fouilloux G., Le Signor C. Lejeune-Hénaut I., 2002. Genetic studies of selection criteria for productive and stable peas. Euphytica 127, 261–273.
Brown J., Caligari P.D.S. 1988. The use of multivariate cross prediction methods in the breeding of a clonally reproduced crop (Solanum tuberosum). Heredity, 60, 147-153
Camussi A., Ottaviano E., Caliski T., Kaczmarek Z. 1985. Genetic distances based on quantitative traits. Genetics 111, 945-962
Cheres M.T., Miller J.F., Crane J.M., Knapp S.J. 2000. Genetic distance as a predictor of heterosis and hybrid performance within and between groups of sunflower. Theor. Appl. Genet. 100, 889-894
Cilas C., Bouharmont P., Boccara M., Eskes A.B., Baradat Ph. 1998. Prediction of genetic value for coffee production in Coffea arabica from a half-diallel with lines and hybrids. Euphytica 104, 49-59
Corbellini M., Perenzin M., Accerbi M., Vaccino P., Borghi B. 2002. Genetic diversity in bread wheat, as revealed by coefficient of parentage and molecular markers, and its relationship to hybrid performance. Euphytica 123, 273-285
Damerval C., Hebert Y., and De Vienne D. 1987. Is the polymorphism of protein amounts related to phenotypic variability? A comparison of two-dimensional electrophoresis data with morphological traits in maize. Theor. Appl. Genet. 74, 194-202
Daoyu Z., Lawes G.S. 2000. Manova and discriminant analysis of phenotypic data as a guide for parent selection in kiwifruit (Actinidia deliciosa) breeding. Euphytica 114, 151-157
Dias L.A.S., Kageyama P.Y. 1997. Multivariate genetic divergence and hybrid performance of cacao (Theobroma cacao L.). Braz. J. Genet. 20, 63-70
Dias L.A.S., Marita J., Cruz, Cruz C.D., Barros E.G., Salomao T.M.F. 2003. Genetic distance and its association with heterosis in cacao. Braz. Arch. Biol. Technol. 46, 339-348
Dillmann C., Bar-Hen A., Gurin D., Charcosset A., Murigneux A. 1997. Comparison of RFLP and morphological distances between maize Zea mays L. inbred lines. Consequences for germplasm protection purposes. Theor. Appl. Genet. 95, 92-102
Drzewiecki J., Warzecha R. 2000. Elektroforegramy zein i podobieństwo genetyczne komponentów rodzicielskich mieszańców kukurydzy a efekt heterozji. Biuletyn IHAR 216, 365-370
Falconer D.S. 1991. Introduction to quantitative genetics. Oliver and Boyd, Edinburgh Fehr W.R. 1987. Principles of line development. MacMillan, New York
GenStat Release 4.21. 2001. Lawes Agricultural Trust, Rothamsted Experimental Station
Gopal J., Minocha J.L. 1997. Genetic divergence for cross prediction in potato. Euphytica 97, 269-275
Górczyński J., Mądry W. 1988. A study of genetic divergence of plants by multivariate methods. Genetica Polonica 29, 341-352
Griffing. B. 1956. Concept of general and specific combining ability in relation to diallel crosses systems. Austr. J. Biol. Sci. 9, 463-493
Kaczmarek Z., Krajewski P. 1992, Wielocechowa analiza zdolności kombinacyjnej linii rodzicielskich na podstawie krzyżowania diallelicznego. XXII Coll. Metodol. z Agrobiom. 238-249
Kaczmarek Z., Łuczkiewicz T., 2001. Multivariate analysis of quantitative traits inbred lines and hybrids of sunflower (Helianthus annuus L.). Agriculture 2, 69–76.
Karsai I., Mészáros K., Láng L., Hayes P. M., Bedö Z., 2001. Multivariate analysis of traits determining adaptation in cultivated barley. Plant Breeding 120, 217–222.
Lee J. Kaltsikes P. J., 1973. The application of Mahalanobis generalized distance to measure genetic divergence in durum wheat. Euphytica 22, 124–131.
Lui Z. Q., Pei Y., Pu Z. J., 1999. Relationship between hybrid performance and genetic diversity based on RAPD markers in wheat, Triticum aestivum L. Plant Breed. 118, 119–123.
Łuczkiewicz T., Kaczmarek Z., 2004. The influence of morphological differences between sunflower inbred lines on their SCA effects for yield components. J. Appl. Genet. 45, 175–182.
Mądry W., 1993. Studia statystyczne nad wielowymiarową oceną zróznicowania cech ilościowych w kolekcjach zasobów genowych zbóż. Wyd. SGGW, Rozpr. Nauk. i Monogr., Warszawa.
Mądry W., Krajewski P., Sieczko L., 2004. Zastosowanie analizy zmiennych kanonicznych do wielocechowej charakterystyki zdolności kombinacyjnej odmian porzeczki czarnej (Ribes nigrum L.) Coll. Biom. (w druku).
Meinel A., Richter C., Bätz G., 1997. Breeding aspects of clustering winter wheat cultivars for yield response. Plant Breeding 116, 437–441.
Moser H., Lee M., 1994. RFLP variation and genealogical distance, multivariate distance, heterosis, and genetic variance in oats. Theor. Appl. Genet. 87, 947–956.
Pluta S., 1994. Analiza dialleliczna wybranych form rodzicielskich porzeczki czarnej (Ribes nigrum L.) pod względem najważniejszych cech użytkowych. Praca doktorska, Instytut Sadownictwa i Kwiaciarstwa, Skierniewice.
Ray I. M., Segovia-Lerma A., Murray L. W., Townsend M. S., 2003. Heterosis and AFLP marker diversity among nine alfalfa germplasms. Genome 46, 51–58.
Riday H., Brummer E. H., Campbell T. A., Luth D., Cazcarro P. M., 2003. Comparisons of genetic and morphological distance with heterosis between Medicago sativa subsp. sativa and subsp. falcata. Euphytica 131, 37–45.
Seber G. A. F., 1984. Multivariate observations. Wiley, New York.
Sekhon M. S., Gupta V. P., 1995. Genetic distance and heterosis in Indian mustard: developmental isozymes as indicators of genetic relationships. Theor. Appl. Genet. 91, 1148–1152.
Shamsuddin A. K. M., 1985. Genetic diversity in relation to heterosis and combining ability in spring wheat. Theor. Appl. Genet. 70, 306–308.
Stuber C. W., Lincoln S. E., Wolff D. W., Helentjaris T., Landr E. S., 1992. Identification of genetic factors contributing to heterosis in a hybrid from two elite maize inbred lines using molecular markers. Genetics 132, 823–839.
Tsegaye S., Tesemma T., Belay G., 1996. Relationships among tetraploid wheat (Triticum turgidum L.) landrace populations revealed by isozyme markers and agronomic traits. Theor. Appl. Genet. 93, 600–605.
Virmani S. S., 1994. Heterosis and Hybrid Rice Breeding. Monographs on Theoretical and Applied Genetics 22, Springer-Verlag, Berlin.
Żurawicz E., Mądry W. Pluta S., 1996. Variation and heritability of economically important traits in black currant (Ribes nigrum L.) evaluated in a diallel cross design. Euphytica 91, 219–224.
Albuquerque A. S., Bruckner C. H., Cruz C. D., Salomão L. C. C., 1998. Multivariate analysis of genetic diversity of peach and nectarine cultivars. Acta Hort. (ISHS) 465, 285–292.
Ali M., Copeland L. O., Elias S. G., Kelly J. D., 1995. Relationship between genetic distance and heterosis for yield and morphological traits in winter canola (Brassica napus L.). Theor. Appl. Genet. 91, 118–121.
Bernardo R., 1992. Relationship between single cross performance and molecular marker heterozygosity. Theor Appl Genet 83, 628–634.
Betrán F. J., Ribaut J. M., Beck D., Gonzalez de León D., 2003. Genetic diversity, specific combining ability, and heterosis in tropical maize under stress and nonstress environments. Crop Sci. 43, 797–806.
Bhatt G. M., 1970. Multivariate analysis approach to selection of parents for hybridization aiming at yield improvement. Aust. J. Agric. Res. 21, 1–7.
Bos I., Sparnaaij L. D., 1993. Component analysis of complex characters in plant breeding. II. The pursuit of heterosis. Euphytica 70, 237–245.
Bourion V., Fouilloux G., Le Signor C. Lejeune-Hénaut I., 2002. Genetic studies of selection criteria for productive and stable peas. Euphytica 127, 261–273.
Brown J., Caligari P.D.S. 1988. The use of multivariate cross prediction methods in the breeding of a clonally reproduced crop (Solanum tuberosum). Heredity, 60, 147-153
Camussi A., Ottaviano E., Caliski T., Kaczmarek Z. 1985. Genetic distances based on quantitative traits. Genetics 111, 945-962
Cheres M.T., Miller J.F., Crane J.M., Knapp S.J. 2000. Genetic distance as a predictor of heterosis and hybrid performance within and between groups of sunflower. Theor. Appl. Genet. 100, 889-894
Cilas C., Bouharmont P., Boccara M., Eskes A.B., Baradat Ph. 1998. Prediction of genetic value for coffee production in Coffea arabica from a half-diallel with lines and hybrids. Euphytica 104, 49-59
Corbellini M., Perenzin M., Accerbi M., Vaccino P., Borghi B. 2002. Genetic diversity in bread wheat, as revealed by coefficient of parentage and molecular markers, and its relationship to hybrid performance. Euphytica 123, 273-285
Damerval C., Hebert Y., and De Vienne D. 1987. Is the polymorphism of protein amounts related to phenotypic variability? A comparison of two-dimensional electrophoresis data with morphological traits in maize. Theor. Appl. Genet. 74, 194-202
Daoyu Z., Lawes G.S. 2000. Manova and discriminant analysis of phenotypic data as a guide for parent selection in kiwifruit (Actinidia deliciosa) breeding. Euphytica 114, 151-157
Dias L.A.S., Kageyama P.Y. 1997. Multivariate genetic divergence and hybrid performance of cacao (Theobroma cacao L.). Braz. J. Genet. 20, 63-70
Dias L.A.S., Marita J., Cruz, Cruz C.D., Barros E.G., Salomao T.M.F. 2003. Genetic distance and its association with heterosis in cacao. Braz. Arch. Biol. Technol. 46, 339-348
Dillmann C., Bar-Hen A., Gurin D., Charcosset A., Murigneux A. 1997. Comparison of RFLP and morphological distances between maize Zea mays L. inbred lines. Consequences for germplasm protection purposes. Theor. Appl. Genet. 95, 92-102
Drzewiecki J., Warzecha R. 2000. Elektroforegramy zein i podobieństwo genetyczne komponentów rodzicielskich mieszańców kukurydzy a efekt heterozji. Biuletyn IHAR 216, 365-370
Falconer D.S. 1991. Introduction to quantitative genetics. Oliver and Boyd, Edinburgh Fehr W.R. 1987. Principles of line development. MacMillan, New York
GenStat Release 4.21. 2001. Lawes Agricultural Trust, Rothamsted Experimental Station
Gopal J., Minocha J.L. 1997. Genetic divergence for cross prediction in potato. Euphytica 97, 269-275
Górczyński J., Mądry W. 1988. A study of genetic divergence of plants by multivariate methods. Genetica Polonica 29, 341-352
Griffing. B. 1956. Concept of general and specific combining ability in relation to diallel crosses systems. Austr. J. Biol. Sci. 9, 463-493
Kaczmarek Z., Krajewski P. 1992, Wielocechowa analiza zdolności kombinacyjnej linii rodzicielskich na podstawie krzyżowania diallelicznego. XXII Coll. Metodol. z Agrobiom. 238-249
Kaczmarek Z., Łuczkiewicz T., 2001. Multivariate analysis of quantitative traits inbred lines and hybrids of sunflower (Helianthus annuus L.). Agriculture 2, 69–76.
Karsai I., Mészáros K., Láng L., Hayes P. M., Bedö Z., 2001. Multivariate analysis of traits determining adaptation in cultivated barley. Plant Breeding 120, 217–222.
Lee J. Kaltsikes P. J., 1973. The application of Mahalanobis generalized distance to measure genetic divergence in durum wheat. Euphytica 22, 124–131.
Lui Z. Q., Pei Y., Pu Z. J., 1999. Relationship between hybrid performance and genetic diversity based on RAPD markers in wheat, Triticum aestivum L. Plant Breed. 118, 119–123.
Łuczkiewicz T., Kaczmarek Z., 2004. The influence of morphological differences between sunflower inbred lines on their SCA effects for yield components. J. Appl. Genet. 45, 175–182.
Mądry W., 1993. Studia statystyczne nad wielowymiarową oceną zróznicowania cech ilościowych w kolekcjach zasobów genowych zbóż. Wyd. SGGW, Rozpr. Nauk. i Monogr., Warszawa.
Mądry W., Krajewski P., Sieczko L., 2004. Zastosowanie analizy zmiennych kanonicznych do wielocechowej charakterystyki zdolności kombinacyjnej odmian porzeczki czarnej (Ribes nigrum L.) Coll. Biom. (w druku).
Meinel A., Richter C., Bätz G., 1997. Breeding aspects of clustering winter wheat cultivars for yield response. Plant Breeding 116, 437–441.
Moser H., Lee M., 1994. RFLP variation and genealogical distance, multivariate distance, heterosis, and genetic variance in oats. Theor. Appl. Genet. 87, 947–956.
Pluta S., 1994. Analiza dialleliczna wybranych form rodzicielskich porzeczki czarnej (Ribes nigrum L.) pod względem najważniejszych cech użytkowych. Praca doktorska, Instytut Sadownictwa i Kwiaciarstwa, Skierniewice.
Ray I. M., Segovia-Lerma A., Murray L. W., Townsend M. S., 2003. Heterosis and AFLP marker diversity among nine alfalfa germplasms. Genome 46, 51–58.
Riday H., Brummer E. H., Campbell T. A., Luth D., Cazcarro P. M., 2003. Comparisons of genetic and morphological distance with heterosis between Medicago sativa subsp. sativa and subsp. falcata. Euphytica 131, 37–45.
Seber G. A. F., 1984. Multivariate observations. Wiley, New York.
Sekhon M. S., Gupta V. P., 1995. Genetic distance and heterosis in Indian mustard: developmental isozymes as indicators of genetic relationships. Theor. Appl. Genet. 91, 1148–1152.
Shamsuddin A. K. M., 1985. Genetic diversity in relation to heterosis and combining ability in spring wheat. Theor. Appl. Genet. 70, 306–308.
Stuber C. W., Lincoln S. E., Wolff D. W., Helentjaris T., Landr E. S., 1992. Identification of genetic factors contributing to heterosis in a hybrid from two elite maize inbred lines using molecular markers. Genetics 132, 823–839.
Tsegaye S., Tesemma T., Belay G., 1996. Relationships among tetraploid wheat (Triticum turgidum L.) landrace populations revealed by isozyme markers and agronomic traits. Theor. Appl. Genet. 93, 600–605.
Virmani S. S., 1994. Heterosis and Hybrid Rice Breeding. Monographs on Theoretical and Applied Genetics 22, Springer-Verlag, Berlin.
Żurawicz E., Mądry W. Pluta S., 1996. Variation and heritability of economically important traits in black currant (Ribes nigrum L.) evaluated in a diallel cross design. Euphytica 91, 219–224.
Wiesław Mądry
Warsaw Agricultural University
Warsaw Agricultural University
Paweł Krajewski
Institute of Genetics, Polish Academy of Sciences
Institute of Genetics, Polish Academy of Sciences
Stanisław Pluta
Institute of Horticulture in Skierniewice
Institute of Horticulture in Skierniewice
Edward Edward Żurawicz
Institute of Horticulture in Skierniewice
Institute of Horticulture in Skierniewice
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